Online information

For an up-to-date list of my recent publications, check out my ORCID page, which lists publications, preprints, and other digital artifacts.

You can also check out my Google Scholar page, although I spend less time making sure this one is correct (boo information silos!)

Recent publications



Christopher Holdgraf, Stefan Appelhoff, Matthew Sanderson, Teon Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Alexandre Gramfort, and Mainak Jas. Mne-bids: organizing electrophysiological data into the bids format and facilitating their analysis. Journal of Open Source Software, 2019. URL:, doi:10.21105/joss.01896.


Christopher Holdgraf. Ieeg-bids, extending the brain imaging data structure specification to human intracranial electrophysiology. Scientific Data, 2019. URL:, doi:10.31234/


Leah Wasser, Maxwell Joseph, Joe McGlinchy, Jenny Palomino, Nathan Korinek, Chris Holdgraf, and Tim Head. EarthPy: a python package that makes it easier to explore and plot raster and vector data using open source python tools. Journal of Open Source Software, 4(43):1886, nov 2019. URL:, doi:10.21105/joss.01886.


Christopher Holdgraf. Pybids: python tools for bids datasets. Journal of open source software, 2019. URL:, doi:10.21105/joss.01294.



R. Stuart Geiger, Nelle Varoquaux, Charlotte Mazel-Cabasse, and Chris Holdgraf. The types, roles, and practices of documentation in data analytics open source software libraries. Computer Supported Cooperative Work (CSCW), 27(3-6):767–802, may 2018. URL:, doi:10.1007/s10606-018-9333-1.


Project Jupyter, Matthias Bussonnier, Jessica Forde, Jeremy Freeman, Brian Granger, Tim Head, Chris Holdgraf, Kyle Kelley, Gladys Nalvarte, Andrew Osheroff, M Pacer, Yuvi Panda, Fernando Perez, Benjamin Ragan-Kelley, and Carol Willing. Binder 2.0 - reproducible, interactive, sharable environments for science at scale. In Proceedings of the 17th Python in Science Conference. SciPy, 2018. URL:, doi:10.25080/majora-4af1f417-011.



Christopher R. Holdgraf, Jochem W. Rieger, Cristiano Micheli, Stephanie Martin, Robert T. Knight, and Frederic E. Theunissen. Encoding and decoding models in cognitive electrophysiology. Frontiers in Systems Neuroscience, sep 2017. URL:, doi:10.3389/fnsys.2017.00061.


Chris Holdgraf, Aaron Culich, Ariel Rokem, Fatma Deniz, Maryana Alegro, and Dani Ushizima. Portable learning environments for hands-on computational instruction. In Proceedings of the Practice and Experience in Advanced Research Computing 2017 on Sustainability, Success and Impact - PEARC17. ACM Press, 2017. URL:, doi:10.1145/3093338.3093370.



Christopher R. Holdgraf, Wendy de Heer, Brian Pasley, Jochem Rieger, Nathan Crone, Jack J. Lin, Robert T. Knight, and Frédéric E. Theunissen. Rapid tuning shifts in human auditory cortex enhance speech intelligibility. Nature Communications, dec 2016. URL:, doi:10.1038/ncomms13654.



Stéphanie Martin, Peter Brunner, Chris Holdgraf, Hans-Jochen Heinze, Nathan E. Crone, Jochem Rieger, Gerwin Schalk, Robert T. Knight, and Brian N. Pasley. Decoding spectrotemporal features of overt and covert speech from the human cortex. Frontiers in Neuroengineering, may 2014. URL:, doi:10.3389/fneng.2014.00014.



John L. Sfondouris, Tabitha M. Quebedeaux, Chris Holdgraf, and Alberto E. Musto. Combined process automation for large-scale EEG analysis. Computers in Biology and Medicine, 42(1):129–134, jan 2012. URL:, doi:10.1016/j.compbiomed.2011.10.017.